BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036G08SP1|AL430286
(915 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1145 443 e-124
>3x_Contig1145
Length = 5226
Score = 443 bits (223), Expect = e-124
Identities = 245/250 (98%), Gaps = 2/250 (0%)
Strand = Plus / Minus
Query: 1 gatcaatcgaaaatggctaagttcttgaaagctggtaaagttggtacgtatacctgatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gatcaatcgaaaatggctaagttcttgaaagctggtaaagttggtacgtatacctgatta 203
Query: 61 caatgataccgtttatggggaaaaggaaaccatttcatctagacttgagtgtaacgnant 120
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |
Sbjct: 202 caatgataccgtttatggggaaaaggaaaccatctcatctagacttgagtgtaacgaa-t 144
Query: 121 taatgtgtggaatggtaagacgaaatactgaagaaaactccaaagcaatgaatacatcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 taatgtgtggaatggtaagacgaaatactgaagaaaactccaaagcaatgaatacatcaa 84
Query: 181 cttcagatactattgagaatgactgtgatagagcaacgatcaacctgcccctatttgtgg 240
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 83 cctcagatactattgagaatgactgtgatagagcaacgatcaacctgcccctatttgt-g 25
Query: 241 gaaatgtttc 250
||||||||||
Sbjct: 24 gaaatgtttc 15
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6243
Number of Sequences: 1807
Number of extensions: 6243
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 915
length of database: 10,358,551
effective HSP length: 16
effective length of query: 899
effective length of database: 10,329,639
effective search space: 9286345461
effective search space used: 9286345461
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)